Details of microorganism genetic resources

Details of MAFF 302145
MAFF No.302145
CategoryBacterium
Scientific namePseudomonas syringae pv. actinidiae Takikawa, Serizawa, Ichikawa, Tsuyumu and Goto 1989
Taxonomic statusApproved strain
Validation✔The current name marked was taxonomically verified by NARO Genebank.
Subclassificationbiovar 1 (Psa 1, Psa J)
IdentifierN. Kita
SourceActinidia deliciosa (A.Chev.) C.F.Liang et A.R.Ferguson (Actinidia chinensis Planch. var. hispida C.F.Liang)
LocationJAPAN (WAKAYAMA)
Isolation dateMay 1988
DepositorK. Ushiyama
DesignationWa1
MediumMeat extract 10.0g, Peptone 10.0g, NaCl 1.0g, Agar 15.0g
Temperature25℃
Sequence16S acnB cts gapA gyrB pfk pgi rpoD
Genome dataJAAEYG000000000
Reference
  • Fujikawa, T. and Sawada, H. (2016). Genome analysis of the kiwifruit canker pathogen Pseudomonas syringae pv. actinidiae biovar 5. Scientific Reports 6: 21399. [10.1038/srep21399]
  • Fujikawa, T., Hatomi, H. and Sawada, H. (2020). Draft genome sequences of 10 strains of Pseudomonas syringae pv. actinidiae biovar 1, a major kiwifruit bacterial canker pathogen in Japan. Microbiology Resource Announcements 9(35): e00759-20. [10.1128/MRA.00759-20]
  • McCann, H.C., Li, L., Liu, Y., Li, D., Pan, H., Zhong, C., Rikkerink, E.H.A., Templeton, M.D., Straub, C., Colombi, E., Rainey, P.B. and Huang, H. (2017). Origin and evolution of the kiwifruit canker pandemic. Genome Biology and Evolution 9(4): 932-944. [10.1093/gbe/evx055]
  • Sawada, H. (2016). Characteristics of pathogens causing bacterial canker of kiwifruit in Japan. Annual Report on Exploration and Introduction of Microbial Genetic Resources 25: 103-110. [gene.affrc.go.jp]
  • Sawada, H. and Fujikawa, T. (2019). Genetic diversity among biovars of kiwifruit canker pathogen Pseudomonas syringae pv. actinidiae. Japanese Journal of Phytopathology (Annals of the Phytopathological Society of Japan) 85(1): 3-17. [10.3186/jjphytopath.85.3]
  • Sawada, H. and Fujikawa, T. (2019). Genetic diversity of Pseudomonas syringae pv. actinidiae, pathogen of kiwifruit bacterial canker. Plant Pathology 68(7): 1235-1248. [10.1111/ppa.13040]
  • Sawada, H., Kondo, K. and Nakaune, R. (2016). Novel biovar (biovar 6) of Pseudomonas syringae pv. actinidiae causing bacterial canker of kiwifruit (Actinidia deliciosa) in Japan. Japanese Journal of Phytopathology (Annals of the Phytopathological Society of Japan) 82(2): 101-115. [10.3186/jjphytopath.82.101]
  • Sawada, H., Miyoshi, T. and Ide, Y. (2014). Novel MLSA group (Psa5) of Pseudomonas syringae pv. actinidiae causing bacterial canker of kiwifruit (Actinidia chinensis) in Japan. Japanese Journal of Phytopathology (Annals of the Phytopathological Society of Japan) 80(3): 171-184. [10.3186/jjphytopath.80.171]
  • Sawada, H., Miyoshi, T., Shimizu, S., Nakaune, R. and Fujikawa, T. (2014). Diversity of pathogens causing kiwifruit bacterial canker. Plant Protection 68(11): 660-667. [jppa.or.jp]
  • Sawada, H., Nagai, T. and Aoki, T. (2018). Re-identification of strains belonging to the genus Pseudomonas preserved in the Genebank project, NARO. Plant Protection 72(5): 305-314. [jppa.or.jp]
  • Sawada, H., Suzuki, F., Matsuda, I. and Saitou, N. (1999). Phylogenetic analysis of Pseudomonas syringae pathovars suggests the horizontal gene transfer of argK and the evolutionary stability of hrp gene cluster. Journal of Molecular Evolution 49(5): 627-644. [10.1007/PL00006584]
  • Sawada, H., Takeuchi, T. and Matsuda, I. (1997). Comparative analysis of Pseudomonas syringae pv. actinidiae and pv. phaseolicola based on phaseolotoxin-resistant ornithine carbamoyltransferase gene (argK) and 16S-23S rRNA intergenic spacer sequences. Applied and Environmental Microbiology 63(1): 282-288. [aem.asm.org]
  • Shinohara, H. (2014). Bactericide susceptibility of plant pathogenic bacteria. MAFF Microorganism Genetic Resources Manual 36: 1-15. [gene.affrc.go.jp]
  • Suzaki, K., Sawada, H. and Kisaki, G. (2022). Loop-mediated isothermal amplification of bacterial effector genes to detect Pseudomonas syringae pv. actinidiae biovars 1 and 3. Journal of General Plant Pathology 88(1): 2-9. [10.1007/s10327-021-01030-9]
Application for distributionOrder