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Detailed information of microorganism genetic resources

MAFF No.663002
CategoryBacterium
Scientific nameRhizobium rhizogenes (Riker, Banfield, Wright, Keitt and Sagen 1930) Young, Kuykendall, Martinez-Romero, Kerr and Sawada 2001 (Ti)
Validation✔The current name marked was taxonomically verified by NARO Genebank.
Reidentified byH. Sawada (Updated: Oct 2013)
Deposited asAgrobacterium tumefaciens (Smith and Townsend 1907) Conn 1942
IdentifierH. Sawada
Taxonomic statusApproved strain
SourcePyrus pyrifolia Nakai
Site on the sourceroot
LocationJAPAN (MIE)
Isolation dateJan 1988
IsolatorH. Sawada
DepositorH. Sawada
DesignationP-Ag-1
MediumPotato Peptone Glucose Agar, modified (Potato infusion from 100.0g, Dipotassium phosphate 5.0g, Glucose 5.0g, Peptone 5.0g, NaCl 0.5g, Ferrous sulfate trace, Agar 15.0g) pH 7.0-
Temperature28℃
HazardPathogenic (plant)
PropertyPathogenicity (Pears Crown gall)
Sequence16S atpD glnA recA
ReferenceBautista-Zapanta, J., Arafat, H.H., Tanaka, K., Sawada, H. and Suzuki, K., Variation of 16S-23S internally transcribed spacer sequence and intervening sequence in rDNA among the three major Agrobacterium species, Microbiological Research, 164(6), 604-612, 2009 [DOI]
Kawaguchi, A., Sawada, H., Inoue, K. and Nasu, H., Multiplex PCR for the identification of Agrobacterium biovar 3 strains, Journal of General Plant Pathology, 71(1), 54-59, 2005 [DOI]
Sawada, H. and Ieki, H., Phenotypic characteristics of the genus Agrobacterium, Japanese Journal of Phytopathology (Annals of the Phytopathological Society of Japan), 58(1), 37-45, 1992 [DOI]
Sawada, H., Agrobacteria ─(1) Introduction of their profiles─, Microbial Resources and Systematics (Microbiology and Culture Collections), 22(2), 117-121, 2006 [URL]
Sawada, H., Agrobacteria ─(2) Present status of their systematics─, Microbial Resources and Systematics (Microbiology and Culture Collections), 23(1), 29-34, 2007 [URL]
Sawada, H., Ieki, H. and Matsuda, I., PCR detection of Ti and Ri plasmids from phytopathogenic Agrobacterium strains, Applied and Environmental Microbiology, 61(2), 828-831, 1995 [URL]
Sawada, H., Simultaneous identification of phytopathogenic Rhizobium species (former Agrobacterium species) using multiplex colony-direct PCR, Japanese Journal of Phytopathology (Annals of the Phytopathological Society of Japan), 81(4), 332-340, 2015 [DOI]
Sawada, H., Studies on differentiation and taxonomy of the genus Agrobacterium, Bulletin of the Fruit Tree Research Station, 5, 1-110, 1994 [URL]
Sawada, H., Suzaki, K. and Kawaguchi, A., Simultaneous plasmid profiling of phytopathogenic Rhizobium species (former Agrobacterium species) using multiplex colony-direct PCR, Japanese Journal of Phytopathology (Annals of the Phytopathological Society of Japan), 82(2), 116-124, 2016 [DOI]
Sawada, H., Takikawa, Y. and Ieki, H., Fatty acid methyl ester profiles of the genus Agrobacterium, Japanese Journal of Phytopathology (Annals of the Phytopathological Society of Japan), 58(1), 46-51, 1992 [DOI]
Sawada, H., Takikawa, Y. and Makino, T., Update of scientific names of crown gall and hairy root bacteria isolated in Japan, Plant Protection, 69(2), 106-112, 2015 [URL]
Sawada, H., Tomioka, K., Nagai, T., Aoki, T., Endo, M., Hirooka, Y. and Sato, T., Agrobacteria ─(3) Viewpoints for considering their systematics─, Microbial Resources and Systematics (Microbiology and Culture Collections), 23(2), 95-99, 2007 [URL]
Sawada, H., Yamasaki, F., Takeya, M. and Aoki, T., Changing situation relevant to the taxonomy of phytopathogenic Rhizobium species and their re-identification in NIAS Genebank, Microbial Resources and Systematics (Microbiology and Culture Collections), 30(1), 13-27, 2014 [URL]
AvailabilityYes