Details of microorganism genetic resources

Details of MAFF 302378
MAFF No.302378
CategoryBacterium
Scientific nameRhizobium radiobacter (Beijerinck and van Delden 1902) Young, Kuykendall, Martinez-Romero, Kerr and Sawada 2001 (Ti)
Taxonomic statusApproved strain
Validation✔The current name marked was taxonomically verified by NARO Genebank.
Reidentified byH. Sawada (Updated: Oct 2013)
Subclassificationgenomovar G8
Deposited asAgrobacterium tumefaciens (Smith and Townsend 1907) Conn 1942
IdentifierT. Makino
SourceChrysanthemum morifolium Ramat.
LocationJAPAN (SHIZUOKA)
Isolation dateDec 1985
DepositorT. Makino
DesignationCH5
MediumIFO Medium 227 (=ISP Medium 2) (Malt extract 4.0g, Fructose 2.0g, Lactose 2.0g, Xylose 2.0g, Polypepton 1.0g, Yeast extract 1.0g, Agar 20.0g (Malt extract 10.0g, Glucose 4.0g, Yeast extract 4.0g, Agar 20.0g) (IFO-227)) pH 7.0
Temperature25℃
PropertyPathogenicity
Sequence16S atpD glnA recA
Reference
  • Kang, B., Maeshige, T., Okamoto, A., Kataoka, Y., Yamamoto, S., Rikiishi, K., Tani, A., Sawada, H. and Suzuki, K. (2020). The presence of the hairy-root-disease-inducing (Ri) plasmid in wheat endophytic rhizobia explains a pathogen reservoir function of healthy resistant plants. Applied and Environmental Microbiology 86: e00671-20. [10.1128/AEM.00671-20]
  • Sawada, H. (1994). Studies on differentiation and taxonomy of the genus Agrobacterium. Bulletin of the Fruit Tree Research Station 5: 1-110. [agriknowledge.affrc.go.jp]
  • Sawada, H. (2006). Agrobacteria ─(1) Introduction of their profiles─. Microbial Resources and Systematics (Microbiology and Culture Collections) 22(2): 117-121. [jsmrs.jp]
  • Sawada, H. (2007). Agrobacteria ─(2) Present status of their systematics─. Microbial Resources and Systematics (Microbiology and Culture Collections) 23(1): 29-34. [jsmrs.jp]
  • Sawada, H. (2015). Simultaneous identification of phytopathogenic Rhizobium species (former Agrobacterium species) using multiplex colony-direct PCR. Japanese Journal of Phytopathology (Annals of the Phytopathological Society of Japan) 81(4): 332-340. [10.3186/jjphytopath.81.332]
  • Sawada, H. and Ieki, H. (1992). Phenotypic characteristics of the genus Agrobacterium. Japanese Journal of Phytopathology (Annals of the Phytopathological Society of Japan) 58(1): 37-45. [10.3186/jjphytopath.58.37]
  • Sawada, H., Ieki, H. and Matsuda, I. (1995). PCR detection of Ti and Ri plasmids from phytopathogenic Agrobacterium strains. Applied and Environmental Microbiology 61(2): 828-831. [aem.asm.org]
  • Sawada, H., Suzaki, K. and Kawaguchi, A. (2016). Simultaneous plasmid profiling of phytopathogenic Rhizobium species (former Agrobacterium species) using multiplex colony-direct PCR. Japanese Journal of Phytopathology (Annals of the Phytopathological Society of Japan) 82(2): 116-124. [10.3186/jjphytopath.82.116]
  • Sawada, H., Takikawa, Y. and Makino, T. (2015). Update of scientific names of crown gall and hairy root bacteria isolated in Japan. Plant Protection 69(2): 106-112. [jppa.or.jp]
  • Sawada, H., Tomioka, K., Nagai, T., Aoki, T., Endo, M., Hirooka, Y. and Sato, T. (2007). Agrobacteria ─(3) Viewpoints for considering their systematics─. Microbial Resources and Systematics (Microbiology and Culture Collections) 23(2): 95-99. [jsmrs.jp]
  • Sawada, H., Yamasaki, F., Takeya, M. and Aoki, T. (2014). Changing situation relevant to the taxonomy of phytopathogenic Rhizobium species and their re-identification in NIAS Genebank. Microbial Resources and Systematics (Microbiology and Culture Collections) 30(1): 13-27. [jsmrs.jp]
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